Docs · Omnis platform

Choose the docs lane you need

Start with the product or outcome you are actually here for: PatentChecker evaluation, BioFlow APIs, BioCost reporting, or public proof and benchmark material.

Public docsQuickstartsProof artifactsAPIs

Easy start

Choose your path

Use these routes when you want a fast answer instead of scanning the entire public docs tree first.

PatentChecker docs hub

PatentChecker

Buyer path, verification, demos, self-hosting, and operator quickstarts inside the PatentChecker docs lane.

Open path ->

BioFlow APIs and runs

BioFlow

Workspace signup, onboarding, telemetry, and generated API reference for flow execution.

Open path ->

BioCost quickstart

BioCost

Deterministic run-cost analysis for Nextflow-style outputs with report and benchmark context.

Open path ->

Proofs and benchmarks

Proof

Public benchmark pack, releases, and proof bundles for technical diligence and internal review.

Open path ->

Viewing

Documentation overview

PatentChecker buyers start here BioFlow API reference Benchmark pack Releases

Key sections

Start Here (Fast Path)If You Need BioFlow Right Now If You Need BioCost Right Now Core Public Docs PatentChecker Self-Serve Docs HelixMCP

Mobile navigation

Jump to section

Open

Public documentation for Omnis Genomics tools. If you want to run something immediately, use the start path below.

Start Here (Fast Path)

BioCost quickstart - fastest path to deterministic cost and runtime analysis for Nextflow artifacts.
OGN CLI quickstart - run HG002 and your own samples from the command line.
BioFlow quickstart - start with a verified run, a signed bundle, and the hosted workspace path.
Pilot quickstart (Docker Compose demo) - launch the local demo stack and export proof artifacts.
Proof bundle demo - inspect the exact artifact shape buyers and reviewers verify.

If You Need BioFlow Right Now

Read: BioFlow quickstart
Open the hosted console: /platform/bioflow
Read the contract details: BioFlow API reference

If You Need BioCost Right Now

Read: BioCost quickstart
Copy-paste run path:

BashRunnable example

cd ~/BioCost
python3 -m venv .venv
. .venv/bin/activate
python -m pip install -e '.[dev]'
./demo/run_demo.sh --check

Core Public Docs

OGN Core Kit (open source) - public runner, Job Spec v1 contract, SDKs, and workflow adapters.
GPU support matrix - supported GPUs and configurations.
Platform architecture - system overview.

Docs are Markdown-backed and loaded into the /docs registry for deterministic rendering and search.

PatentChecker Self-Serve Docs

PatentChecker docs hub - docs-native entry point for buyer eval, verification, demos, and operator setup.
PatentChecker coverage scope - current strongest path, evaluation scoping model, and default non-claims.
PatentChecker self-serve onboarding - client preflight + one-shot run + offline verify.
PatentChecker self-serve starter - .env and compose starter kit.
PatentChecker security posture - supply chain + scan posture + verification model.
PatentChecker enzyme-platform quickstart - WIPO/PCT polymerase analysis, patent-text provenance, and typed comparisons.

HelixMCP

HelixMCP toolpack example (ABI v1) - out-of-tree template for writing a toolpack that conforms to the frozen ABI.

API Reference (OpenAPI)

Spec: openapi/ogn.public.swagger.json
Offline viewers: docs/openapi/swagger.html, docs/openapi/redoc.html